Code & scripts

Below are a number of links that provide code and scripts for ecological data analysis from our own projects.


Trait data integration

  • We have developed an open-source workflow for harmonizing heterogeneous trait measurements of plants (e.g. lengths, widths, counts and angles of stems, leaves, fruits and inflorescence parts) as well as additional information related to taxonomy, measurement or fact and occurrence. The details are published in Lenters et al. (2021). The code and scripts are available as:


Species richness modelling




Macroevolutionary analyses


Spatial autocorrelation and regression modelling